@mjs, I have the same problem. I went and copied and pasted them in as you suggested, and the files are all there. However, in-game, they are still not recognized. The same goes for my character files, which I wish to import in BG2ee but cannot because they don't show up in either game. Thoughts? Please actually respond...
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For BG1EE: Library > Containers > com.beamdog.baldursgateenhancededition > Data > Documents > Baldur's Gate - Enhanced Edition > save
For BG2EE: Library > Containers > com.beamdog.baldursgateIIenhancededition > Data > Documents > Baldur's Gate II - Enhanced Edition > save